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High-quality AFM image acquisition of living cells by modified residual encoder-decoder network

  • Junxi Wang
    ,
  • Fan Yang
    ,
  • Bowei Wang
    ,
  • Mengnan Liu
    ,
  • Xia Wang
    ,
  • Rui Wang
  • Changchun University of Science and Technology
Research Output: Contribution to journal Article Peer-review

Abstract

Atomic force microscope enables ultra-precision imaging of living cells. However, atomic force microscope imaging is a complex and time-consuming process. The obtained images of living cells usually have low resolution and are easily influenced by noise leading to unsatisfactory imaging quality, obstructing the research and analysis based on cell images. Herein, an adaptive attention image reconstruction network based on residual encoder-decoder was proposed, through the combination of deep learning technology and atomic force microscope imaging supporting high-quality cell image acquisition. Compared with other learning-based methods, the proposed network showed higher peak signal-to-noise ratio, higher structural similarity and better image reconstruction performances. In addition, the cell images reconstructed by each method were used for cell recognition, and the cell images reconstructed by the proposed network had the highest cell recognition rate. The proposed network has brought insights into the atomic force microscope-based imaging of living cells and cell image reconstruction, which is of great significance in biological and medical research.

Publication Information

Output type

Research Output: Contribution to journal Article Peer-review

Original language

English

Article number

108107

Journal (Volume, Issue Number)

Journal of Structural Biology (Volume 216, Issue 3)

Publication milestones

  • Accepted/In press - 17/06/2024
  • Published - 19/06/2024

Publication status

Published - 19/06/2024

ISSN

1047-8477

External Publication IDs

  • Scopus: 85196615494
  • PubMed: 38906499