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Detoxification gene families at the genome-wide level of Rhus gall aphid Schlechtendalia chinensis

  • Hongli He
    ,
  • James Crabbe
    ,
  • Zhumei Ren
  • Shanxi University
    ,
  • University of Oxford
Research Output:
Contribution to journal
Article
 Peer-review

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Abstract

The Rhus gall aphid Schlechtendalia chinensis uses the species Rhus chinensis as its primary host plant, on which galls are produced. The galls have medicinal properties and can be used in various situations due to their high tannin content. Detoxification enzymes play significant roles in the insect lifecycle. In this study, we focused on five detoxification gene families, i.e., glutathione-Stransferase (GST), ABC transporter (ABC), Carboxylesterase (CCE), cyto-chrome P450 (CYP), and UDP-glycosyltransferase (UDP), and manually annotated 144 detoxification genes of S. chinensis using genome-wide techniques. The detoxification genes appeared mostly on chromosome 1, where a total of two pair genes were identified to show tandem duplications. There were 38 gene pairs between genomes of S. chinensis and Acyrthosiphon pisum in the detoxification gene families by collinear comparison. Ka/Ks ratios showed that detoxification genes of S. chinensis were mainly affected by purification selection during evolution. The gene expression numbers of P450s and ABCs by transcriptome sequencing data were greater, while gene expression of CCEs was the highest, suggesting they might be important in the detoxification process. Our study has firstly identified the genes of the different detoxification gene families in the S. chinensis genome, and then analyzed their general features and expression, demonstrating the importance of the detoxification genes in the aphid and providing new information for further research.

Publication Information

Output type

Research Output:
Contribution to journal
Article
 Peer-review

Original language

English

Article number

1627

Journal (Volume, Issue Number)

Genes (Volume 13, Issue 9)

Publication milestones

  • Accepted/In press - 07/09/2022
  • Published - 10/09/2022

Publication status

Published - 10/09/2022

Publication IDs

  • handle.net: 10547/625527
  • Scopus: 85138348878

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