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High-quality AFM image acquisition of living cells by modified residual encoder-decoder network

  • Junxi Wang
  • , Fan Yang
  • , Bowei Wang
  • , Mengnan Liu
  • , Xia Wang
  • , Rui Wang
  • , Guicai Song*
  • , Zuobin Wang
  • *Corresponding author for this work
    • Changchun University of Science and Technology

    Research output: Contribution to journalArticlepeer-review

    3 Citations (Scopus)

    Abstract

    Atomic force microscope enables ultra-precision imaging of living cells. However, atomic force microscope imaging is a complex and time-consuming process. The obtained images of living cells usually have low resolution and are easily influenced by noise leading to unsatisfactory imaging quality, obstructing the research and analysis based on cell images. Herein, an adaptive attention image reconstruction network based on residual encoder-decoder was proposed, through the combination of deep learning technology and atomic force microscope imaging supporting high-quality cell image acquisition. Compared with other learning-based methods, the proposed network showed higher peak signal-to-noise ratio, higher structural similarity and better image reconstruction performances. In addition, the cell images reconstructed by each method were used for cell recognition, and the cell images reconstructed by the proposed network had the highest cell recognition rate. The proposed network has brought insights into the atomic force microscope-based imaging of living cells and cell image reconstruction, which is of great significance in biological and medical research.

    Original languageEnglish
    Article number108107
    JournalJournal of Structural Biology
    Volume216
    Issue number3
    DOIs
    Publication statusPublished - 19 Jun 2024

    Keywords

    • Adaptive attention
    • Atomic force microscope
    • Image reconstruction
    • Living cells
    • Residual encoder-decoder network
    • Microscopy, Atomic Force/methods
    • Humans
    • Signal-To-Noise Ratio
    • Image Processing, Computer-Assisted/methods
    • Deep Learning

    ASJC Scopus subject areas

    • Structural Biology

    Research Themes

    • Generative Artificial Intelligence and Machine Learning

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