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Confident interpretation of Bayesian decision tree ensembles for clinical applications

  • Vitaly Schetinin*
  • , Jonathan E. Fieldsend
  • , Derek Partridge
  • , Timohty J. Coats
  • , Wojtek J. Krzanowski
  • , Rihcard M. Everson
  • , Trevor C. Bailey
  • , Adolfo Hernandez
  • *Corresponding author for this work
  • University of Exeter
  • Leicester Royal Infirmary

Research output: Contribution to journalArticlepeer-review

54 Citations (Scopus)

Abstract

Bayesian averaging (BA) over ensembles of decision models allows evaluation of the uncertainty of decisions that is of crucial importance for safety-critical applications such as medical diagnostics. The interpretability of the ensemble can also give useful information for experts responsible for making reliable decisions. For this reason, decision trees (DTs) are attractive decision models for experts. However, BA over such models makes an ensemble of DTs uninterpretable. In this paper, we present a new approach to probabilistic interpretation of Bayesian DT ensembles. This approach is based on the quantitative evaluation of uncertainty of the DTs, and allows experts to find a DT that provides a high predictive accuracy and confident outcomes. To make the BA over DTs feasible in our experiments, we use a Markov Chain Monte Carlo technique with a reversible jump extension. The results obtained from clinical data show that in terms of predictive accuracy, the proposed method outperforms the maximum a posteriori (MAP) method that has been suggested for interpretation of DT ensembles.

Original languageEnglish
Pages (from-to)312-319
Number of pages8
JournalIEEE Transactions on Information Technology in Biomedicine
Volume11
Issue number3
DOIs
Publication statusPublished - 31 May 2007

Keywords

  • Bayes procedures
  • Monte Carlo method
  • Trees
  • Uncertainty

ASJC Scopus subject areas

  • Biotechnology
  • Computer Science Applications
  • Electrical and Electronic Engineering

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